PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G122615_P01
Common NameNAC94, Zm.132205
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family NAC
Protein Properties Length: 329aa    MW: 36083.8 Da    PI: 5.9373
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G122615_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.24.5e-25161475128
                NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                        f+ hP+  elv+ yL+  ve+   +   +i+++d+y ++P dL +      ++++e+ wyf+s  + k+++gkrk+r+t sg+W++  k k+
  GRMZM2G122615_P01  16 FQSHPSHTELVDSYLRTWVEDGVKTG-AFIHDADVYGSDPADLLQqfapvVAHNGERAWYFYSLLRYKHSSGKRKKRSTGSGTWHSEAKPKP 106
                        6779****************999666.78**************64367766667889*********************************** PP

                NAM  92 vlsk...kgelvglkktLvfykgrapkge..ktdWvmheyrl 128
                        v+ +   + +++gl++t+ f   r+++g   +t W+m e rl
  GRMZM2G122615_P01 107 VFMAsksNWHQIGLRQTFSFV-VRNETGAlfRTGWIMMEHRL 147
                        *9985555567*********9.455555445********987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.10112174IPR003441NAC domain
PfamPF023652.0E-1314147IPR003441NAC domain
SuperFamilySSF1019415.89E-3016170IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MTHSPLAAIK PPRPFFQSHP SHTELVDSYL RTWVEDGVKT GAFIHDADVY GSDPADLLQQ  60
FAPVVAHNGE RAWYFYSLLR YKHSSGKRKK RSTGSGTWHS EAKPKPVFMA SKSNWHQIGL  120
RQTFSFVVRN ETGALFRTGW IMMEHRLLND DGEEKQQEEE GFLVYRVLCK VYRSPRKPEP  180
SGNKAAAAAS PGHKIEADDD ESNDATLDEN DDDESNDATL DENDDGSNAA PPAASGRKRK  240
SDDVEPSEAK ASDVIAGGAA AAPAPKKKSD GSSSPVATSP TTEMQCPGCG HHVLVTMNRA  300
EPKSQTEIAK DESAPGARQQ GEIRMYEFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-111417217166Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G122615
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G122615_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7270230.0KJ727023.1 Zea mays clone pUT4004 NAC transcription factor (NAC94) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001143757.10.0uncharacterized protein LOC100276519
TrEMBLA0A060D5C90.0A0A060D5C9_MAIZE; NAC transcription factor (Fragment)
STRINGGRMZM2G122615_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Representative plantOGRP1201646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-14NAC domain containing protein 42